Browsing by Subject "Parallel architectures"

Now showing items 1-5 of 5

    • Article  

      CHARMM: The biomolecular simulation program 

      Brooks, B. R.; Brooks III, C. L.; Mackerell Jr., A. D.; Nilsson, L.; Petrella, R. J.; Roux, B.; Won, Y.; Archontis, Georgios Z.; Bartels, C.; Boresch, S.; Caflisch, A.; Caves, L.; Cui, Q.; Dinner, A. R.; Feig, M.; Fischer, S.; Gao, J.; Hodoscek, M.; Im, W.; Kuczera, K.; Lazaridis, T.; Ma, J.; Ovchinnikov, V.; Paci, E.; Pastor, R. W.; Post, C. B.; Pu, J. Z.; Schaefer, M.; Tidor, B.; Venable, R. M.; Woodcock, H. L.; Wu, X.; Yang, W.; York, D. M.; Karplus, M. (2009)
      CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and widely used molecular simulation program. It has been developed over the last three decades with a primary focus on molecules of biological interest, ...
    • Article  

      Fine-grain parallelism using multi-core, Cell/BE, and GPU systems 

      Pratas, F.; Trancoso, Pedro; Sousa, L.; Stamatakis, A.; Shi, G.; Kindratenko, V. (2012)
      Currently, we are facing a situation where applications exhibit increasing computational demands and where a large variety of parallel processor systems are available. In this paper we focus on exploiting fine-grain ...
    • Article  

      Memory assignment for multiprocessor caches through grey coloring 

      Agarwal, A.; Guttag, J. V.; Hadjicostis, Christoforos N.; Papaefthymiou, M. C. (1994)
      The achieved performance of multiprocessors is heavily dependent on the performance of their caches. Cache performance is severely degraded when data tiles used by a program conflict in the caches. This paper explores ...
    • Conference Object  

      Parallel computing using Java mobile agents 

      Panayiotou, Christoforos; Samaras, George S.; Pitoura, Evaggelia 1967-; Evripidou, Paraskevas (1999)
      We propose a mobile-agent parallel processing framework that uses multiple Java mobile agents, each one of which utilizes multithreading. A mobile agent can travel at any Web site to perform its tasks. We also introduce ...
    • Conference Object  

      Scalable and dynamic global power management for multicore chips 

      Otoom, M.; Trancoso, Pedro; Almasaeid, H.; Alzubaidi, M. (Association for Computing Machinery, 2015)
      The design for continuous computer performance is increasingly becoming limited by the exponential increase in the power consumption. In order to improve the energy efficiency of multicore chips, we propose a novel global ...