The protein structure prediction module of the prot-grid information system
Ημερομηνία
2003ISBN
972-98816-1-8Εκδότης
Escola Superior de Tecnologia do Instituto Politecnico de SetubalSource
ICEIS 2003 - Proceedings of the 5th International Conference on Enterprise Information Systems5th International Conference on Enterprise Information Systems, ICEIS 2003
Volume
2Pages
372-378Google Scholar check
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Εμφάνιση πλήρους εγγραφήςΕπιτομή
In this work, we describe the protein secondary structure prediction module of a distributed bio-informatics system. Protein databases contain over a million of sequenced proteins, however there is structuring information for at most 2% of that number. The challenge is to reliably predict the structure based on classifiers. Our contribution is the evaluation of architectures of multiple classifier systems on a standard dataset (CB- 396) containing protein sequencing information. We compare the results of a single classifier system based on SVMs, as well as with our version of an SVM based adaBoost algorithm and a novel fuzzy multi-SVM classifier.
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